Jatropha Genome Database

JcCB0428571.10 (JcS_107691.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0428571
Scaffold:
JcS_107691 JcCA0315091(+) =JcCB0428571(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9HJH7_POPTR 215 62.4 75.8 (tr|B9HJH7) Rna-dependent RNA polymerase OS=Populus trichocarpa GN=RDR902 PE=4 SV=1
Arabidopsis_pep AT1G14790.1 189 54.5 72.1 | Symbols: RDR1, ATRDRP1 | RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/ nucleic acid binding | chr1:5094317-5097817 REVERSE
soybean_pep Glyma02g09470.1 194 54.8 71.4  
Medicago_pep IMGA|Medtr8g125360.1 62.8 26.4 50.9 RNA-binding region RNP-1 (RNA recognition motif); RNA dependent RNA polymerase chr08_pseudomolecule_IMGAG_V3 29220511-29225570 E EGN_Mt090430 20090702
grape_pep GSVIVT01011645001 139 45.1 61.6  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c12686 605 96.4 96.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0428571.10 length: 164 aa.
IPR000504 RNA recognition motif, RNP-1
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 8.8e-05 7-69
HMMSmart SM00360 no description 0.00011 4-79
ProfileScan PS50102 RRM 9.269 3-88
no_ID  
superfamily SSF54928 RNA-binding 5.7e-08 2-89