Jatropha Genome Database

JcCB0427111.10 (JcS_102325.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0427111
Scaffold:
JcS_102325 JcCB0427111(+) =JcCB0059641(-) =JcCA0308491(+) =JcCB0380351(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RB46_RICCO 162 65.0 74.8 (tr|B9RB46) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1511300 PE=4 SV=1
Arabidopsis_pep AT1G49220.1 74.7 45.8 54.2 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr1:18205946-18206701 FORWARD
soybean_pep Glyma04g35240.1 105 51.9 63.9  
Medicago_pep IMGA|Medtr6g059190.1 81.3 43.2 56.8 Zinc finger, RING-type chr06_pseudomolecule_IMGAG_V3 10603586-10602176 E EGN_Mt090430 20090702
grape_pep GSVIVT01009098001 74.7 35.6 49.5  
castor_bean_cds 30147.m013971 167 84.9 84.9 conserved hypothetical protein
castor_bean_pep 30147.m013971 162 65.0 74.8 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0427111.10 length: 141 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 no description 9.1e-07 80-121
ProfileScan PS50089 ZF_RING_2 11.781 80-122
IPR018957 Zinc finger, C3HC4 RING-type
HMMPfam PF00097 zf-C3HC4 2.2e-06 80-121
no_ID  
Gene3D G3DSA:3.30.40.10 no description 4.5e-14 73-127
HMMPanther PTHR22764 RING 3.6e-16 79-133
Seg seg seg NA 5-27
superfamily SSF57850 RING/U-box 5.6e-16 73-127