Jatropha Genome Database

JcCB0402071.10 (JcS_104760.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0402071
Scaffold:
JcS_104760 JcCB0402071(+) =JcCB0137471(+) =JcCA0304251(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9H3K0_POPTR 630 93.5 96.6 (tr|B9H3K0) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_858606 PE=3 SV=1
Arabidopsis_pep AT5G17330.1 622 91.3 95.6 | Symbols: GAD, GAD1 | GAD; calmodulin binding / glutamate decarboxylase | chr5:5711141-5714839 FORWARD
soybean_pep Glyma02g40840.1 626 92.5 96.0  
Medicago_pep IMGA|Medtr3g086860.1 621 91.6 95.3 Glutamate decarboxylase; chr03_pseudomolecule_IMGAG_V3 20503200-20508077 F EGN_Mt090430 20090702
grape_pep GSVIVT01011565001 624 91.6 97.2  
castor_bean_cds 27914.m000425 904 88.4 88.4 glutamate decarboxylase, putative
castor_bean_pep 27914.m000427 624 91.9 96.6 glutamate decarboxylase, putative
JAT_13201ests gi|268523916|gb|FM890602.1|FM890602 143 81.6 81.6 FM890602 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000496, mRNA sequence
KJC_r1 KJC_c01163 890 88.0 88.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0402071.10 length: 321 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11999 GROUP 5.4e-176 46-318
HMMPfam PF00282 Pyridoxal_deC 1.1e-85 35-320
IPR010107 Glutamate decarboxylase
Molecular Function GO:0004351 glutamate decarboxylase activity    
Biological Process GO:0006536 glutamate metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11999:SF1 GLUTAMATE 5.4e-176 46-318
HMMTigr TIGR01788 Glu-decarb-GAD: 5.1e-187 16-321
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 3.6e-25 64-312
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 4.7e-96 3-321