Jatropha Genome Database

JcCB0398461.10 (JcS_100892.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0398461
Scaffold:
JcS_100892 JcCA0274811(+) =JcCA0300671(+) =JcCB0398461(-) =JcCA0262171(-) =JcCB0332161(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9T208_RICCO 402 57.6 71.7 (tr|B9T208) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0549160 PE=4 SV=1
Arabidopsis_pep AT3G07870.1 303 44.3 61.0 | Symbols: | F-box family protein | chr3:2510871-2512124 FORWARD
soybean_pep Glyma15g12190.2 137 29.0 47.6  
Medicago_pep IMGA|Medtr3g006070.1 147 29.0 46.3 Cyclin-like F-box; F-box protein interaction domain chr03_pseudomolecule_IMGAG_V3 616061-614913 H EGN_Mt090430 20090702
grape_pep GSVIVT01013506001 130 29.2 44.2  
castor_bean_cds 29642.m000276 60.0 86.4 86.4 conserved hypothetical protein
castor_bean_pep 29642.m000276 402 57.6 71.7 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0398461.10 length: 384 aa.
IPR001810 Cyclin-like F-box
method AccNumber shortName E-value location
HMMPfam PF00646 F-box 6.4e-08 2-39
HMMSmart SM00256 no description 1.3e-05 4-43
ProfileScan PS50181 FBOX 12.650 1-48
IPR006527 F-box associated domain, type 1
HMMPfam PF07734 FBA_1 4.7e-08 213-332
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 1e-21 96-352
no_ID  
Gene3D G3DSA:3.80.10.10 no description 6.9e-05 2-40
HMMPanther PTHR22844 F-BOX 9.4e-05 4-37
HMMPanther PTHR22844:SF4 SULFUR 9.4e-05 4-37
superfamily SSF81383 F-box 1e-12 1-47