Jatropha Genome Database

JcCB0394911.10 (JcS_100130.80)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0394911
Scaffold:
JcS_100130 JcCA0310961(+) =JcCB0085061(-) =JcCB0235721(+) =JcCA0251661(+) =JcCB0394911(+) =JcCB0174221(+) =JcCA0305451(+) =JcCB0109281(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9ST76_RICCO 688 75.6 83.1 (tr|B9ST76) DNA binding protein, putative OS=Ricinus communis GN=RCOM_0684820 PE=4 SV=1
Arabidopsis_pep AT1G72390.1 384 48.4 60.9 | Symbols: | unknown protein | chr1:27245455-27251218 FORWARD
soybean_pep Glyma07g04690.1 385 53.4 67.3  
Medicago_pep IMGA|Medtr8g025570.1 460 52.4 67.0 hypothetical protein chr08_pseudomolecule_IMGAG_V3 5222331-5218168 E EGN_Mt090430 20090702
grape_pep GSVIVT01016716001 471 57.0 66.2  
castor_bean_cds 29727.m000488 1239 86.5 86.5 DNA binding protein, putative
castor_bean_pep 29727.m000488 688 75.6 83.1 DNA binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c05467 1681 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0394911.10 length: 473 aa.
IPR021950 Spt20 family
method AccNumber shortName E-value location
HMMPfam PF12090 Spt20 5.2e-12 2-103
no_ID  
Seg seg seg NA 114-128
391-406
449-464