Jatropha Genome Database

JcCB0389891.20 (JcS_101048.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0389891
Scaffold:
JcS_101048 JcCB0134471(+) =JcCA0306971(+) =JcCB0389891(-) =JcCD0061002(-) =JcCB1005201(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S2Z0_RICCO 139 92.2 96.1 (tr|B9S2Z0) Porphobilinogen deaminase, putative OS=Ricinus communis GN=RCOM_1534040 PE=3 SV=1
Arabidopsis_pep AT5G08280.1 119 79.2 88.3 | Symbols: HEMC | HEMC (HYDROXYMETHYLBILANE SYNTHASE); hydroxymethylbilane synthase | chr5:2663763-2665596 REVERSE
soybean_pep Glyma12g02380.1 137 89.6 94.8  
Medicago_pep IMGA|Medtr4g104180.1 133 87.0 93.5 Porphobilinogen deaminase chr04_pseudomolecule_IMGAG_V3 22656866-22660007 E EGN_Mt090430 20090702
grape_pep GSVIVT01002505001 137 92.2 96.1  
castor_bean_cds 30153.m000741 270 91.7 91.7 porphobilinogen deaminase, putative
castor_bean_pep 30153.m000741 139 92.2 96.1 porphobilinogen deaminase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04348 343 98.0 98.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0389891.20 length: 99 aa.
IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase
method AccNumber shortName E-value location
Molecular Function GO:0004418 hydroxymethylbilane synthase activity    
Biological Process GO:0033014 tetrapyrrole biosynthetic process    
HMMPanther PTHR11557 PORPHOBILINOGEN 3.3e-20 9-81
HMMPfam PF01379 Porphobil_deam 2.1e-25 11-81
no_ID  
Gene3D G3DSA:3.40.190.10 no description 6.8e-14 11-65
superfamily SSF53850 Periplasmic 2.4e-21 11-85