Jatropha Genome Database

JcCB0389381.10 (JcS_101878.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0389381
Scaffold:
JcS_101878 JcCA0082931(-) =JcCA0240561(-) =JcCB0107371(+) =JcCB0389381(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RH77_RICCO 503 70.2 81.5 (tr|B9RH77) ATP binding protein, putative OS=Ricinus communis GN=RCOM_1447940 PE=3 SV=1
Arabidopsis_pep AT3G50930.1 320 50.5 71.6 | Symbols: BCS1 | BCS1 (CYTOCHROME BC1 SYNTHESIS); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | chr3:18929817-18931547 FORWARD
soybean_pep Glyma02g06020.1 311 49.5 69.2  
Medicago_pep IMGA|Medtr8g092850.1 290 42.4 67.5 AAA ATPase, central region chr08_pseudomolecule_IMGAG_V3 20140374-20137588 H EGN_Mt090430 20090702
grape_pep GSVIVT01023810001 315 48.7 63.7  
castor_bean_cds 30131.m007069 351 79.2 79.2 ATP binding protein, putative
castor_bean_pep 30131.m007069 503 70.2 81.5 ATP binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0389381.10 length: 351 aa.
IPR003959 ATPase, AAA-type, core
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 8.4e-09 257-320
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.3e-16 214-323
HMMPanther PTHR23070 BCS1 2.2e-148 15-322
HMMPanther PTHR23070:SF1 AAA-TYPE 2.2e-148 15-322
Seg seg seg NA 14-26
177-190
superfamily SSF52540 P-loop 1.3e-20 145-314