Jatropha Genome Database

JcCB0383651.10 (JcS_100183.100)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0383651
Scaffold:
JcS_100183 JcCB0736301(+) =JcCA0046261(-) =JcCB0428011(+) =JcCB0510081(+) =JcCB0383651(-) =JcCB0123121(-) =JcCA0297911(+) =JcCA0306361(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D2D962_9ROSI 109 83.1 93.2 (tr|D2D962) 60S ribosomal protein L18a OS=Jatropha curcas PE=2 SV=1
Arabidopsis_pep AT3G14600.1 99.0 74.6 86.4 | Symbols: | 60S ribosomal protein L18A (RPL18aC) | chr3:4910773-4911933 FORWARD
soybean_pep Glyma14g03380.1 107 80.0 91.7  
Medicago_pep IMGA|Medtr5g098330.3 104 78.3 88.3 Ribosomal L18ae protein chr05_pseudomolecule_IMGAG_V3 39203439-39204271 F EGN_Mt090430 20090702
grape_pep GSVIVT01021430001 104 78.0 91.5  
castor_bean_cds 29693.m002025 168 87.9 87.9 60S ribosomal protein L18a, putative
castor_bean_pep 29989.m000434 106 79.7 91.5 60S ribosomal protein L18a, putative
JAT_13201ests gi|237681002|gb|GO247638.1|GO247638 345 99.5 99.5 JcrME_RL1182 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c00228 345 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0383651.10 length: 68 aa.
IPR002670 Ribosomal protein L18ae
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPanther PTHR10052:SF1 60S 3.9e-16 21-53
IPR021138 Ribosomal protein L18ae/LX
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPfam PF01775 Ribosomal_L18ae 4.1e-19 4-57
no_ID  
HMMPanther PTHR10052 60S 3.9e-16 21-53