Jatropha Genome Database

JcCB0375141.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0375141
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RF68_RICCO 406 91.9 97.6 (tr|B9RF68) DNA polymerase OS=Ricinus communis GN=RCOM_1431670 PE=3 SV=1
Arabidopsis_pep AT1G67500.1 380 84.3 93.8 | Symbols: ATREV3 | ATREV3 (ARABIDOPSIS THALIANA RECOVERY PROTEIN 3); DNA binding / DNA-directed DNA polymerase | chr1:25287707-25296714 REVERSE
soybean_pep Glyma03g39720.1 389 88.0 95.7  
Medicago_pep IMGA|Medtr7g139140.1 373 80.4 88.8 DNA-directed DNA polymerase B chr07_pseudomolecule_IMGAG_V3 33209886-33202421 H EGN_Mt090430 20090702
grape_pep GSVIVT01000087001 387 88.0 94.3  
castor_bean_cds 30128.m008782 737 90.3 90.3 DNA polymerase zeta catalytic subunit, putative
castor_bean_pep 30128.m008782 406 91.9 97.6 DNA polymerase zeta catalytic subunit, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0375141.10 length: 240 aa.
IPR006134 DNA-directed DNA polymerase, family B, conserved region
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006260 DNA replication    
HMMPfam PF00136 DNA_pol_B 5.4e-59 16-232
IPR006172 DNA-directed DNA polymerase, family B
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process    
HMMPanther PTHR10322 DNA 1.5e-145 24-235
IPR017964 DNA-directed DNA polymerase, family B, conserved site
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process    
PatternScan PS00116 DNA_POLYMERASE_B NA 124-132
no_ID  
HMMPanther PTHR10322:SF5 DNA 1.5e-145 24-235
superfamily SSF56672 DNA/RNA 4.8e-64 26-231