Jatropha Genome Database

JcCB0374601.10 (JcS_104661.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0374601
Scaffold:
JcS_104661 JcCB0036911(+) =JcCA0307051(+) =JcCB0374601(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9T7Z2_RICCO 415 87.2 93.2 (tr|B9T7Z2) Peptidylprolyl isomerase, putative OS=Ricinus communis GN=RCOM_0242150 PE=4 SV=1
Arabidopsis_pep AT3G25230.1 356 78.2 88.4 | Symbols: ROF1, ATFKBP62, FKBP62 | ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase | chr3:9188257-9191137 FORWARD
soybean_pep Glyma03g21690.1 381 81.9 88.8  
Medicago_pep IMGA|Medtr8g012700.1 372 78.2 87.6 Peptidylprolyl isomerase, FKBP-type chr08_pseudomolecule_IMGAG_V3 2213611-2209029 F EGN_Mt090430 20090702
grape_pep GSVIVT01002899001 388 80.0 86.7  
castor_bean_cds 28401.m000077 708 87.5 87.5 peptidylprolyl isomerase, putative
castor_bean_pep 28401.m000077 415 87.2 93.2 peptidylprolyl isomerase, putative
JAT_13201ests gi|268516717|gb|FM890424.1|FM890424 208 100.0 100.0 FM890424 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_004279, mRNA sequence
KJC_r1 KJC_c00957 850 98.3 98.3  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0374601.10 length: 275 aa.
IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type
method AccNumber shortName E-value location
Biological Process GO:0006457 protein folding    
HMMPanther PTHR10516 FK506 2.2e-82 15-234
HMMPfam PF00254 FKBP_C 3.1e-12 15-69
ProfileScan PS50059 FKBP_PPIASE 15.273 16-72
IPR001440 Tetratricopeptide TPR-1
HMMPfam PF00515 TPR_1 6.3e-08 172-205
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005488 binding    
Gene3D G3DSA:1.25.40.10 no description 7.4e-42 81-246
IPR013026 Tetratricopeptide repeat-containing
ProfileScan PS50293 TPR_REGION 15.391 89-122
138-205
IPR019734 Tetratricopeptide repeat
HMMSmart SM00028 no description 3.1e-06 89-122
138-171
172-205
ProfileScan PS50005 TPR 10.443 89-122
138-171
172-205
no_ID  
Coil coil coiled-coil NA 205-226
Gene3D G3DSA:3.10.50.40 no description 6.8e-17 16-79
HMMPanther PTHR10516:SF8 FK506 2.2e-82 15-234
Seg seg seg NA 84-96
superfamily SSF48452 TPR-like 4.8e-32 76-242
superfamily SSF54534 FKBP-like 2.5e-20 16-93