Jatropha Genome Database

JcCB0366321.10 (JcS_101935.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0366321
Scaffold:
JcS_101935 JcPR04HILCK(+) =JcCB0470521(-) =JcCA0242371(+) =JcCB0366321(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R8C1_RICCO 483 86.2 95.1 (tr|B9R8C1) Multidrug resistance protein 1, 2, putative OS=Ricinus communis GN=RCOM_1598590 PE=4 SV=1
Arabidopsis_pep AT1G27940.1 400 72.0 85.2 | Symbols: PGP13 | PGP13 (P-GLYCOPROTEIN 13); ATPase, coupled to transmembrane movement of substances | chr1:9733597-9738129 REVERSE
soybean_pep Glyma17g37860.1 445 80.0 90.9  
Medicago_pep IMGA|Medtr1g031500.1 421 74.5 88.4 AAA ATPase; ABC transporter, transmembrane region, type 1 chr01_pseudomolecule_IMGAG_V3 7641239-7646521 H EGN_Mt090430 20090702
grape_pep GSVIVT01013125001 323 58.8 77.5  
castor_bean_cds 30170.m014384 632 85.1 85.1 multidrug resistance protein 1, 2, putative
castor_bean_pep 30170.m014384 483 86.2 95.1 multidrug resistance protein 1, 2, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0366321.10 length: 271 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 8.6e-26 68-193
ProfileScan PS50893 ABC_TRANSPORTER_2 24.437 26-262
IPR003593 ATPase, AAA+ type, core
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 no description 1e-16 53-239
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 165-179
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.6e-79 3-260
HMMPanther PTHR19242 ATP-BINDING 1.8e-166 1-265
HMMPanther PTHR19242:SF96 MULTIDRUG 1.8e-166 1-265
superfamily SSF52540 P-loop 3.9e-72 15-262