Jatropha Genome Database

JcCB0357671.10 (JcS_100383.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0357671
Scaffold:
JcS_100383 JcCD0091735(+) =JcCB0357671(-) =JcCB0002291(+) =JcCA0278551(+) =JcCB0087031(+) =JcCA0302591(-) =JcCB0431651(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9TA40_RICCO 387 83.7 92.1 (tr|B9TA40) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_2121360 PE=4 SV=1
Arabidopsis_pep AT2G20020.1 343 73.5 86.5 | Symbols: CAF1, ATCAF1 | CAF1; RNA splicing factor, transesterification mechanism | chr2:8644464-8647090 FORWARD
soybean_pep Glyma08g03930.1 358 75.3 87.9  
Medicago_pep IMGA|Medtr4g159520.1 360 75.3 87.9 Protein of unknown function UPF0044 chr04_pseudomolecule_IMGAG_V3 40260003-40255331 E EGN_Mt090430 20090702
grape_pep GSVIVT01015331001 367 80.0 89.8  
castor_bean_cds 56072.m000045 406 82.9 82.9 conserved hypothetical protein
castor_bean_pep 56072.m000045 387 83.7 92.1 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c05971 547 98.4 98.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0357671.10 length: 241 aa.
IPR001890 RNA-binding, CRM domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Gene3D G3DSA:3.30.110.60 no description 6.3e-06 34-131
HMMPfam PF01985 CRS1_YhbY 9.9e-10 36-119
154-227
ProfileScan PS51295 CRM 12.313 34-130
152-241
superfamily SSF75471 YhbY-like 3e-11 34-131
152-229