Jatropha Genome Database

JcCB0355951.10 (JcS_101957.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0355951
Scaffold:
JcS_101957 JcCB0105731(-) =JcCB0498951(+) =JcCB0355951(-) =JcCA0143731(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RVQ5_RICCO 456 88.8 95.0 (tr|B9RVQ5) 9-cis-epoxycarotenoid dioxygenase, putative OS=Ricinus communis GN=RCOM_0968760 PE=4 SV=1
Arabidopsis_pep AT3G63520.1 422 82.6 90.9 | Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1); 9-cis-epoxycarotenoid dioxygenase | chr3:23452940-23455896 FORWARD
soybean_pep Glyma13g27220.1 434 77.2 86.0  
Medicago_pep IMGA|Medtr5g025290.1 163 38.8 57.8 Carotenoid oxygenase chr05_pseudomolecule_IMGAG_V3 10116366-10118405 E EGN_Mt090430 20090702
grape_pep GSVIVT01032103001 441 86.0 93.0  
castor_bean_cds 29864.m001501 741 87.9 87.9 9-cis-epoxycarotenoid dioxygenase, putative
castor_bean_pep 29864.m001501 456 88.8 95.0 9-cis-epoxycarotenoid dioxygenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c05054 1074 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0355951.10 length: 277 aa.
IPR004294 Carotenoid oxygenase
method AccNumber shortName E-value location
HMMPanther PTHR10543 CARTENOID 2e-91 8-250
HMMPfam PF03055 RPE65 4.7e-69 7-248
no_ID  
HMMPanther PTHR10543:SF1 9-CIS-EPOXYCAROTENOID 2e-91 8-250