Jatropha Genome Database

JcCB0349561.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0349561
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9I5I1_POPTR 540 63.6 77.6 (tr|B9I5I1) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_243072 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 346 40.7 62.1 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 342 41.3 63.2  
Medicago_pep IMGA|Medtr6g008950.1 366 43.4 65.4 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; Terpenoid synthase chr06_pseudomolecule_IMGAG_V3 1339518-1343067 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 409 47.0 67.1  
castor_bean_cds 30169.m006314 87.7 84.2 84.2 Casbene synthase, chloroplast precursor, putative
castor_bean_pep 30169.m006314 508 58.5 76.4 Casbene synthase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0349561.10 length: 420 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 4e-16 1-66
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 1.2e-92 96-364
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 9.3e-26 1-91
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 1.3e-128 70-418
superfamily SSF48576 Terpenoid 2.8e-125 92-418