Jatropha Genome Database

JcCB0341981.10 (JcS_105580.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0341981
Scaffold:
JcS_105580 JcCB0806661(+) =JcCB0055451(-) =JcCB0341981(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SVC2_RICCO 626 87.4 92.6 (tr|B9SVC2) Auxin response factor, putative OS=Ricinus communis GN=RCOM_0034710 PE=4 SV=1
Arabidopsis_pep AT2G28350.1 302 51.6 63.0 | Symbols: ARF10 | ARF10 (AUXIN RESPONSE FACTOR 10); miRNA binding / transcription factor | chr2:12114331-12116665 FORWARD
soybean_pep Glyma12g29720.1 432 65.5 75.8  
Medicago_pep IMGA|Medtr2g110140.1 335 61.5 70.7 Transcriptional factor B3; Auxin response factor; Aux/IAA_ARF_dimerisation chr02_pseudomolecule_IMGAG_V3 25776282-25779770 E EGN_Mt090430 20090702
grape_pep GSVIVT01025198001 456 66.7 74.9  
castor_bean_cds 27538.m000327 1146 88.9 88.9 Auxin response factor, putative
castor_bean_pep 27538.m000327 626 87.4 92.6 Auxin response factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0341981.10 length: 348 aa.
IPR011525 Aux/IAA-ARF-dimerisation
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 21.020 236-314
no_ID  
HMMPfam PF02309 AUX_IAA 2.4e-09 175-311