Jatropha Genome Database

JcCB0340941.10 (JcS_102554.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0340941
Scaffold:
JcS_102554 JcCB0691491(+) =JcCB0400041(+) =JcCB0340941(+) =JcCA0271581(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9H215_POPTR 166 87.6 95.5 (tr|B9H215) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_859146 PE=4 SV=1
Arabidopsis_pep AT4G27360.1 139 69.1 84.0 | Symbols: | dynein light chain, putative | chr4:13694032-13694517 FORWARD
soybean_pep Glyma06g42180.1 154 70.5 81.9  
Medicago_pep IMGA|Medtr2g122840.1 94.4 48.3 68.5 Dynein light chain, type 1 chr02_pseudomolecule_IMGAG_V3 29622280-29621741 E EGN_Mt090430 20090702
grape_pep GSVIVT01014443001 162 72.4 83.8  
castor_bean_cds 30027.m000821 115 85.2 85.2 cytoplasmic dynein light chain, putative
castor_bean_pep 30027.m000821 149 69.5 81.0 cytoplasmic dynein light chain, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0340941.10 length: 105 aa.
IPR001372 Dynein light chain, type 1/2
method AccNumber shortName E-value location
Molecular Function GO:0003777 microtubule motor activity    
Cellular Component GO:0005875 microtubule associated complex    
Biological Process GO:0007017 microtubule-based process    
Gene3D G3DSA:3.30.740.10 no description 6.6e-25 5-91
HMMPanther PTHR11886 DYNEIN 8.7e-37 1-91
HMMPfam PF01221 Dynein_light 6.7e-32 1-90
superfamily SSF54648 DLC 3.6e-26 1-91