Jatropha Genome Database

JcCB0334901.10 (JcS_109612.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0334901
Scaffold:
JcS_109612 JcCB0334901(+) =JcCA0029841(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9ST79_RICCO 241 83.1 91.5 (tr|B9ST79) FLU, putative OS=Ricinus communis GN=RCOM_0684950 PE=4 SV=1
Arabidopsis_pep AT3G14110.2 225 77.5 88.7 | Symbols: FLU | FLU (FLUORESCENT IN BLUE LIGHT); binding | chr3:4676222-4677010 REVERSE
soybean_pep Glyma16g01240.2 224 75.9 90.1  
Medicago_pep IMGA|Medtr8g025640.1 103 59.8 79.3 hypothetical protein chr08_pseudomolecule_IMGAG_V3 5253076-5256352 E EGN_Mt090430 20090702
grape_pep GSVIVT01016719001 225 77.5 89.4  
castor_bean_cds 29727.m000491 371 86.8 86.8 FLU, putative
castor_bean_pep 29727.m000491 241 83.1 91.5 FLU, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0334901.10 length: 203 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005488 binding    
Gene3D G3DSA:1.25.40.10 no description 6.9e-09 82-203
IPR013026 Tetratricopeptide repeat-containing
ProfileScan PS50293 TPR_REGION 12.730 90-203
no_ID  
HMMPanther PTHR10098 RAPSYN-RELATED 2.8e-09 117-197
HMMPanther PTHR10098:SF13 RAPSYN-RELATED 2.8e-09 117-197
Seg seg seg NA 39-46
superfamily SSF48452 TPR-like 1.4e-13 90-203