Jatropha Genome Database

JcCB0329531.10 (JcS_109582.10)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0329531
Scaffold:
JcS_109582 JcCB0329531(-) =JcCA0303171(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5BJL6_VITVI 469 60.2 73.8 (tr|A5BJL6) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017211 PE=4 SV=1
Arabidopsis_pep AT4G23160.1 178 33.4 50.7 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma10g22170.1 385 47.9 68.3  
Medicago_pep IMGA|Medtr4g080020.1 216 34.4 53.8 Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H EGN_Mt090430 20090702
grape_pep GSVIVT01000641001 166 40.8 58.8  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests gi|268520781|gb|FM889539.1|FM889539 440 85.4 85.4 FM889539 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003223, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0329531.10 length: 794 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 8.9e-42 396-550
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 3e-145 397-779
Seg seg seg NA 211-228
264-277
superfamily SSF56672 DNA/RNA 7.1e-13 416-738