Jatropha Genome Database

JcCB0319311.30 (JcS_105054.10)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0319311
Scaffold:
JcS_105054 JcCB0533991(-) =JcCB0319311(-) =JcCB0224001(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q6L3Y5_SOLDE 276 52.0 68.4 (tr|Q6L3Y5) Gag-pol polyprotein, putative OS=Solanum demissum GN=SDM1_46t00012 PE=4 SV=2
Arabidopsis_pep AT3G20980.1 60.5 32.3 50.0 | Symbols: | unknown protein | chr3:7355963-7357966 FORWARD
soybean_pep Glyma07g34840.1 170 35.3 53.9  
Medicago_pep IMGA|Medtr4g114890.1 110 47.0 68.7 gag-pol polyprotein, related chr04_pseudomolecule_IMGAG_V3 26420343-26419721 E EGN_Mt090430 20090702
grape_pep GSVIVT01037631001 181 41.9 56.8  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0319311.30 length: 364 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR11439 GAG-POL-RELATED 1.8e-38 88-361
Seg seg seg NA 138-152
320-332
superfamily SSF57756 Retrovirus 8.5e-06 89-143