Jatropha Genome Database

JcCB0319311.10 (JcS_105054.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0319311
Scaffold:
JcS_105054 JcCB0533991(-) =JcCB0319311(-) =JcCB0224001(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D7U6N5_VITVI 135 67.0 74.2 (tr|D7U6N5) Whole genome shotgun sequence of line PN40024, scaffold_210.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003829001 PE=4 SV=1
Arabidopsis_pep AT2G17650.1 127 72.2 84.8 | Symbols: | AMP-dependent synthetase and ligase family protein | chr2:7671041-7672936 FORWARD
soybean_pep Glyma02g04790.1 130 62.4 73.3  
Medicago_pep IMGA|Medtr8g088410.1 121 55.6 69.2 AMP-dependent synthetase and ligase chr08_pseudomolecule_IMGAG_V3 18721448-18724601 E EGN_Mt090430 20090702
grape_pep GSVIVT01003829001 135 67.0 74.2  
castor_bean_cds 29830.m001428 95.6 86.1 86.1 AMP dependent ligase, putative
castor_bean_pep 29830.m001428 108 74.6 82.1 AMP dependent ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0319311.10 length: 117 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.980 no description 1.1e-07 61-117
HMMPanther PTHR11968 ATP-DEPENDENT 1.5e-30 53-117
HMMPanther PTHR11968:SF26 ADENOSINE 1.5e-30 53-117
superfamily SSF56801 Acetyl-CoA 3.7e-09 40-117