Jatropha Genome Database

JcCB0314321.10 (JcS_100797.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0314321
Scaffold:
JcS_100797 JcCA0136721(-) =JcCB0153301(-) =JcCB0314321(+) =JcCA0286951(-) =JcCB0158891(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RR61_RICCO 422 81.4 85.0 (tr|B9RR61) Auxin response factor, putative OS=Ricinus communis GN=RCOM_0710450 PE=4 SV=1
Arabidopsis_pep AT1G19220.1 348 67.6 76.9 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN RESPONSE FACTOR 19); DNA binding / transcription factor | chr1:6628395-6632779 REVERSE
soybean_pep Glyma09g08350.1 392 75.8 82.7  
Medicago_pep IMGA|Medtr8g132840.1 392 74.9 82.6 Transcriptional factor B3; Auxin response factor; Aux/IAA_ARF_dimerisation chr08_pseudomolecule_IMGAG_V3 31477595-31471354 E EGN_Mt090430 20090702
grape_pep GSVIVT01015035001 399 76.1 83.0  
castor_bean_cds 29739.m003713 981 89.3 89.3 Auxin response factor, putative
castor_bean_pep 29739.m003713 422 81.4 85.0 Auxin response factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_s14915 224 90.4 90.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0314321.10 length: 275 aa.
IPR010525 Auxin response factor
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0009725 response to hormone stimulus    
Biological Process GO:0045449 regulation of transcription    
HMMPfam PF06507 Auxin_resp 1e-38 62-144
no_ID  
Seg seg seg NA 45-53
60-67
175-187