Jatropha Genome Database

JcCB0313501.20 (JcS_108419.30)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0313501
Scaffold:
JcS_108419 JcCB0120521(+) =JcCB0313501(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5BFD6_VITVI 190 58.1 72.5 (tr|A5BFD6) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033829 PE=4 SV=1
Arabidopsis_pep AT4G23160.1 105 35.9 61.4 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma10g21320.1 166 52.6 68.8  
Medicago_pep IMGA|CU179634_24.1 131 42.4 63.0 Polynucleotidyl transferase, Ribonuclease H fold CU179634.6 87152-89450 H EGN_Mt090430 20090702
grape_pep GSVIVT01024357001 56.6 45.8 69.5  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0313501.20 length: 457 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 1.6e-41 82-208
no_ID  
Coil coil coiled-coil NA 62-83
HMMPanther PTHR11439 GAG-POL-RELATED 4.3e-47 71-207
Seg seg seg NA 25-36
409-424
435-457
superfamily SSF56672 DNA/RNA 6.9e-08 81-207