Jatropha Genome Database

JcCB0308331.10 (JcS_100291.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0308331
Scaffold:
JcS_100291 JcCB0308331(+) =JcCA0310551(+) =JcCB0111501(+) =JcCB0379211(-) =JcCD0126540(+) =JcCB0011311(+) =JcCB0234411(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q38JI9_SOLTU 125 100.0 100.0 (tr|Q38JI9) Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1
Arabidopsis_pep AT3G18820.1 125 100.0 100.0 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B | ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F); GTP binding | chr3:6484266-6486005 FORWARD
soybean_pep Glyma11g12630.4 125 100.0 100.0  
Medicago_pep IMGA|Medtr4g095400.1 124 100.0 100.0 Sigma-54 factor, interaction region; Ras small GTPase, Rab type chr04_pseudomolecule_IMGAG_V3 19838057-19834450 F EGN_Mt090430 20090702
grape_pep GSVIVT01031953001 124 100.0 100.0  
castor_bean_cds 30190.m010886 222 90.6 90.6 rab9 and, putative
castor_bean_pep 30190.m010886 125 100.0 100.0 rab9 and, putative
JAT_13201ests gi|268523939|gb|FM890625.1|FM890625 357 100.0 100.0 FM890625 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000527, mRNA sequence
KJC_r1 KJC_c00967 357 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0308331.10 length: 60 aa.
IPR001806 Ras GTPase
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 8.2e-14 9-30
32-48
IPR013753 Ras
HMMPfam PF00071 Ras 9.2e-16 10-60
IPR020851 Small GTPase
ProfileScan PS51419 RAB 12.100 3-60
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.5e-14 1-60
HMMPanther PTHR11708 RAS-RELATED 2.9e-39 1-60
HMMPanther PTHR11708:SF260RAS-RELATED PROTEIN 2.9e-39 1-60
superfamily SSF52540 P-loop 4.7e-17 4-60