Jatropha Genome Database

JcCB0293691.20 (JcS_110314.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0293691
Scaffold:
JcS_110314 JcCB0463991(+) =JcCB0293691(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9IJF9_POPTR 592 85.2 90.8 (tr|B9IJF9) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_668368 PE=4 SV=1
Arabidopsis_pep AT1G80570.1 498 71.5 81.0 | Symbols: | F-box family protein (FBL14) | chr1:30290828-30292231 FORWARD
soybean_pep Glyma15g00720.2 543 78.6 87.8  
Medicago_pep IMGA|Medtr2g026110.1 66.6 28.0 47.7 Cyclin-like F-box chr02_pseudomolecule_IMGAG_V3 7083652-7076263 E EGN_Mt090430 20090702
grape_pep GSVIVT01017521001 503 74.8 81.3  
castor_bean_cds 27446.m000478 654 88.7 88.7 ubiquitin-protein ligase, putative
castor_bean_pep 27446.m000478 543 79.8 84.6 ubiquitin-protein ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0293691.20 length: 337 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 no description 81 43-68
130-155
251-275
276-301
303-326
no_ID  
Gene3D G3DSA:3.80.10.10 no description 5.1e-08 90-248
254-321
HMMPanther PTHR23125 F-BOX/LEUCINE 1.3e-53 1-331
HMMPanther PTHR23125:SF22 F-BOX 1.3e-53 1-331
Seg seg seg NA 172-182
superfamily SSF52047 RNI-like 1.8e-19 16-337