| JcS_101538 | JcCA0131801(+) =JcCA0075121(+) =JcCA0262721(+) =JcCB0284451(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9I614_POPTR | 100 | 61.8 | 82.4 | (tr|B9I614) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_241858 PE=4 SV=1 |
| Arabidopsis_pep | AT3G26932.2 | 70.1 | 44.4 | 63.9 | | Symbols: DRB3 | DRB3 (dsRNA-binding protein 3); RNA binding / double-stranded RNA binding | chr3:9930460-9931714 REVERSE |
| soybean_pep | Glyma05g10870.1 | 107 | 66.7 | 82.6 | |
| Medicago_pep | IMGA|Medtr3g110980.1 | 84.3 | 52.9 | 70.0 | Double-stranded RNA binding chr03_pseudomolecule_IMGAG_V3 28036419-28035926 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01029969001 | 84.3 | 55.1 | 71.0 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | 30072.m000968 | 88.6 | 71.4 | 80.0 | hypothetical protein |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0284451.20 | length: 80 aa. | |||
| IPR001159 | Double-stranded RNA binding | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003725 | double-stranded RNA binding | ||
| Cellular Component | GO:0005622 | intracellular | ||
| HMMPfam | PF00035 | dsrm | 4.6e-15 | 2-65 |
| HMMSmart | SM00358 | no description | 6.9e-13 | 2-69 |
| ProfileScan | PS50137 | DS_RBD | 14.175 | 1-70 |
| IPR014720 | Double-stranded RNA-binding-like | |||
| Molecular Function | GO:0003723 | RNA binding | ||
| Cellular Component | GO:0005622 | intracellular | ||
| Gene3D | G3DSA:3.30.160.20 | no description | 5.4e-09 | 2-71 |
| no_ID | ||||
| HMMPanther | PTHR10910 | EUKARYOTE | 0.00049 | 6-39 |
| HMMPanther | PTHR10910:SF7 | TAR | 0.00049 | 6-39 |
| Seg | seg | seg | NA | 73-80 |
| superfamily | SSF54768 | dsRNA-binding | 1.4e-13 | 2-68 |