Jatropha Genome Database

JcCB0284451.10 (JcS_101538.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0284451
Scaffold:
JcS_101538 JcCA0131801(+) =JcCA0075121(+) =JcCA0262721(+) =JcCB0284451(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D7TKG8_VITVI 65.9 62.5 68.8 (tr|D7TKG8) Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021609001 PE=4 SV=1
Arabidopsis_pep AT4G21120.1 64.3 62.5 66.7 | Symbols: AAT1, CAT1 | AAT1 (AMINO ACID TRANSPORTER 1); L-glutamate transmembrane transporter/ L-lysine transmembrane transporter/ arginine transmembrane transporter/ cationic amino acid transmembrane transporter | chr4:11270318-11273775 FORWARD
soybean_pep Glyma08g13660.1 61.6 56.2 66.7  
Medicago_pep IMGA|Medtr4g137910.1 58.2 54.2 66.7 Amino acid/polyamine transporter I chr04_pseudomolecule_IMGAG_V3 34078658-34082006 E EGN_Mt090430 20090702
grape_pep GSVIVT01021609001 65.9 62.5 68.8  
castor_bean_cds 29932.m000608 99.6 83.8 83.8 cationic amino acid transporter, putative
castor_bean_pep 29932.m000609 62.4 56.2 66.7 cationic amino acid transporter, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0284451.10 length: 148 aa.
IPR002293 Amino acid/polyamine transporter I
method AccNumber shortName E-value location
Biological Process GO:0006865 amino acid transport    
Molecular Function GO:0015171 amino acid transmembrane transporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPanther PTHR11785 AMINO 3.5e-13 74-133
IPR015606 Cationic amino acid transporter
HMMPanther PTHR11785:SF53 CATIONIC 3.5e-13 74-133
no_ID  
Seg seg seg NA 51-64
103-112
122-140