Jatropha Genome Database

JcCB0279151.10 (JcS_100567.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0279151
Scaffold:
JcS_100567 JcCB0279151(-) =JcCB0417211(-) =JcCB0270961(-) =JcCB0480671(-) =JcCB0304081(+) =JcCB0892171(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9IFD4_POPTR 79.7 58.0 68.1 (tr|B9IFD4) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_252735 PE=4 SV=1
Arabidopsis_pep AT3G27030.1 72.8 50.7 62.3 | Symbols: | unknown protein | chr3:9972508-9974225 REVERSE
soybean_pep Glyma19g26210.1 72.4 49.3 63.8  
Medicago_pep IMGA|Medtr4g147170.1 56.2 42.6 55.9 localized according to blastn similarity to EST sequences; therefore, the coding span corresponds only to an area of similarity since the initation codon and stop codon could not be precisely determined, putative chr04_pseudomolecule_IMGAG_V3 36852902-36853310 F EGN_Mt090430 20090702
grape_pep GSVIVT01033068001 58.2 40.6 58.0  
castor_bean_cds 30147.m014486 101 83.9 83.9 conserved hypothetical protein
castor_bean_pep 30190.m010913 71.6 50.7 62.3 conserved hypothetical protein
JAT_13201ests gi|268519636|gb|FM888103.1|FM888103 410 99.5 99.5 FM888103 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001437, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0279151.10 length: 69 aa.
IPR021775 Protein of unknown function DUF3339
method AccNumber shortName E-value location
HMMPfam PF11820 DUF3339 1.1e-31 1-68
no_ID  
Seg seg seg NA 6-23