Jatropha Genome Database

JcCB0268641.10 (JcS_100421.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0268641
Scaffold:
JcS_100421 JcCA0234541(+) =JcCA0073821(+) =JcCB0268641(+) =JcCB0128551(-) =JcCA0077901(-) =JcCB0534371(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SMT2_RICCO 257 68.3 81.2 (tr|B9SMT2) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0470850 PE=4 SV=1
Arabidopsis_pep AT5G11140.1 61.2 34.1 55.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38560.1); Has 72 Blast hits to 72 proteins in 9 species: Archae - 0; Bacteria - 7; Metazoa - 1; Fungi - 6; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:3545343-3546068 FORWARD
soybean_pep Glyma10g42820.1 79.7 39.5 63.0  
Medicago_pep IMGA|Medtr4g138050.1 59.3 30.8 56.7 hypothetical protein chr04_pseudomolecule_IMGAG_V3 34141176-34137826 E EGN_Mt090430 20090702
grape_pep GSVIVT01021521001 67.0 33.0 56.3  
castor_bean_cds 29588.m000853 258 82.4 82.4 conserved hypothetical protein
castor_bean_pep 29588.m000853 257 68.3 81.2 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0268641.10 length: 188 aa.
no_ID  
method AccNumber shortName E-value location
Coil coil coiled-coil NA 168-189
HMMPanther PTHR21704 NIPPED-B-LIKE 3.8e-07 59-187
HMMPanther PTHR21704:SF4 PEARLI 3.8e-07 59-187
HMMPfam PF05278 PEARLI-4 1.7e-20 49-187
Seg seg seg NA 174-185