Jatropha Genome Database

JcCB0249501.20 (JcS_100114.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0249501
Scaffold:
JcS_100114 JcCA0107311(-) =JcCB0186601(+) =JcCB0249501(+) =JcCA0075421(+) =JcCB0173091(-) =JcCA0254771(-) =JcCB0082241(-) =JcCB0704851(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A2ZIZ0_ORYSI 78.6 94.9 97.4 (tr|A2ZIZ0) Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37796 PE=4 SV=1
Arabidopsis_pep AT1G47830.1 74.7 92.1 97.4 | Symbols: | clathrin coat assembly protein, putative | chr1:17613346-17614784 REVERSE
soybean_pep Glyma14g40430.1 76.3 94.7 97.4  
Medicago_pep IMGA|Medtr1g031130.1 75.9 92.3 94.9 Longin-like chr01_pseudomolecule_IMGAG_V3 7487370-7484618 E EGN_Mt090430 20090702
grape_pep GSVIVT01009900001 73.2 89.5 97.4  
castor_bean_cds 30170.m014177 163 95.1 95.1 clathrin coat assembly protein ap17, putative
castor_bean_pep 30170.m014177 76.3 92.3 94.9 clathrin coat assembly protein ap17, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c05526 202 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0249501.20 length: 66 aa.
IPR011012 Longin-like
method AccNumber shortName E-value location
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 3.5e-06 1-41
no_ID  
Gene3D G3DSA:3.30.450.60 no description 0.00018 1-41
HMMPanther PTHR11753 CLATHRIN 1.8e-19 2-39
HMMPanther PTHR11753:SF6 CLATHRIN 1.8e-19 2-39
HMMPfam PF01217 Clat_adaptor_s 2.4e-08 1-40
Seg seg seg NA 47-60