Jatropha Genome Database

JcCB0249431.10 (JcS_200703.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0249431
Scaffold:
JcS_200703 JcCB0249431(+) =JcCB0696881(-) =JcCA0310951(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A9PJW9_9ROSI 255 69.2 74.4 (tr|A9PJW9) Superoxide dismutase [Cu-Zn] OS=Populus trichocarpa x Populus deltoides PE=2 SV=1
Arabidopsis_pep AT2G28190.1 219 88.2 94.1 | Symbols: CSD2, CZSOD2 | CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2); superoxide dismutase | chr2:12014548-12016303 FORWARD
soybean_pep Glyma11g19840.3 228 73.8 78.1  
Medicago_pep IMGA|Medtr4g076170.1 222 63.1 70.8 Superoxide dismutase, copper/zinc binding chr04_pseudomolecule_IMGAG_V3 15060986-15057237 F EGN_Mt090430 20090702
grape_pep GSVIVT01031462001 239 64.9 74.2  
castor_bean_cds 29589.m001265 349 87.8 87.8 superoxide dismutase [cu-zn], putative
castor_bean_pep 29589.m001265 248 69.0 73.1 superoxide dismutase [cu-zn], putative
JAT_13201ests gi|268517110|gb|FM892662.1|FM892662 1023 98.0 98.0 FM892662 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003269, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0249431.10 length: 196 aa.
IPR001424 Superoxide dismutase, copper/zinc binding
method AccNumber shortName E-value location
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00068 CUZNDISMTASE 5e-32 109-131
145-154
164-186
189-196
Gene3D G3DSA:2.60.40.200 no description 1.4e-43 65-195
HMMPanther PTHR10003 CU/ZN 7.8e-58 97-195
HMMPfam PF00080 Sod_Cu 1.3e-42 70-191
superfamily SSF49329 Cu,Zn 2.6e-47 66-192
IPR018152 Superoxide dismutase, copper/zinc, binding site
PatternScan PS00087 SOD_CU_ZN_1 NA 109-119
no_ID  
HMMPanther PTHR10003:SF12 SUPEROXIDE 7.8e-58 97-195
Seg seg seg NA 23-34
51-75