Jatropha Genome Database

JcCB0237641.10 (JcS_105890.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0237641
Scaffold:
JcS_105890 JcCD0169675(+) =JcCB0027861(-) =JcCB0237641(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q9SSU0_9ROSI 626 82.8 88.7 (tr|Q9SSU0) Geranylgeranyl pyrophosphate synthase OS=Croton sublyratus PE=2 SV=1
Arabidopsis_pep AT4G36810.1 465 64.9 76.1 | Symbols: GGPS1 | GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1); farnesyltranstransferase | chr4:17343513-17344628 FORWARD
soybean_pep Glyma16g25620.1 511 68.7 79.8  
Medicago_pep IMGA|Medtr8g093730.1 506 68.4 80.1 Terpenoid synthase chr08_pseudomolecule_IMGAG_V3 20719069-20720655 E EGN_Mt090430 20090702
grape_pep GSVIVT01017730001 322 54.5 69.4  
castor_bean_cds 29646.m001058 728 85.3 85.3 geranyl geranyl pyrophosphate synthase, putative
castor_bean_pep 29646.m001058 577 82.0 87.9 geranyl geranyl pyrophosphate synthase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c09333 1203 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0237641.10 length: 371 aa.
IPR000092 Polyprenyl synthetase
method AccNumber shortName E-value location
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMPfam PF00348 polyprenyl_synt 1.3e-85 108-357
PatternScan PS00444 POLYPRENYL_SYNTHET_2 NA 289-301
PatternScan PS00723 POLYPRENYL_SYNTHET_1 NA 156-172
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 8.2e-90 78-354
superfamily SSF48576 Terpenoid 2.7e-98 80-366
IPR017446 Polyprenyl synthetase-related
HMMPanther PTHR12001 GERANYLGERANYL 1.1e-137 78-371
no_ID  
Coil coil coiled-coil NA 327-355
HMMPanther PTHR12001:SF8 GERANYL 1.1e-137 78-371
Seg seg seg NA 260-274