Jatropha Genome Database

JcCB0237301.10 (JcS_100527.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0237301
Scaffold:
JcS_100527 JcCB0188041(-) =JcCB0237301(-) =JcCB0175111(+) =JcCA0294301(+) =JcCB0487861(+) =JcCB0435511(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RHZ6_RICCO 432 64.7 77.3 (tr|B9RHZ6) Patellin-4, putative OS=Ricinus communis GN=RCOM_1574710 PE=4 SV=1
Arabidopsis_pep AT1G30690.2 319 48.3 65.6 | Symbols: | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | chr1:10888284-10890085 FORWARD
soybean_pep Glyma15g14220.1 340 53.1 68.7  
Medicago_pep IMGA|Medtr4g144520.1 256 41.5 60.0 emp24/gp25L/p24; Cellular retinaldehyde binding/alpha-tocopherol transport; Cellular retinaldehyde-binding/triple function, N-terminal chr04_pseudomolecule_IMGAG_V3 36413995-36417466 E EGN_Mt090430 20090702
grape_pep GSVIVT01021727001 375 49.7 62.1  
castor_bean_cds 30169.m006310 280 81.9 81.9 Patellin-4, putative
castor_bean_pep 30169.m006310 432 64.7 77.3 Patellin-4, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0237301.10 length: 504 aa.
IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006810 transport    
FPrintScan PR00180 CRETINALDHBP 8.8e-05 203-225
331-352
IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal
Gene3D G3DSA:3.40.525.10 no description 1.4e-08 251-350
superfamily SSF52087 CRAL/TRIO 1e-10 235-350
IPR008273 Cellular retinaldehyde-binding/triple function, N-terminal
HMMPfam PF03765 CRAL_TRIO_N 5.3e-09 191-224
IPR009038 GOLD
ProfileScan PS50866 GOLD 10.914 391-492
IPR011074 Phosphatidylinositol transfer protein-like, N-terminal
superfamily SSF46938 CRAL/TRIO 1.4e-13 49-242
no_ID  
Gene3D G3DSA:1.10.8.20 no description 3.1e-06 201-232
HMMPanther PTHR23324 SEC14 1.8e-63 238-491
HMMPanther PTHR23324:SF4 SEC14 1.8e-63 238-491
Seg seg seg NA 36-59
110-119
137-158
482-493
495-504