Jatropha Genome Database

JcCB0237221.10 (JcS_100339.80)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0237221
Scaffold:
JcS_100339 JcCB0069121(-) =JcCB0211371(+) =JcCB0086551(+) =JcCA0289141(+) =JcCB0056181(-) =JcCB0237221(-) =JcCB0031871(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RP35_RICCO 226 58.0 64.9 (tr|B9RP35) ATP binding protein, putative OS=Ricinus communis GN=RCOM_0923890 PE=4 SV=1
Arabidopsis_pep AT4G32280.1 117 34.7 50.6 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID INDUCIBLE 29); transcription factor | chr4:15583479-15584628 FORWARD
soybean_pep Glyma06g07130.1 176 42.9 61.2  
Medicago_pep IMGA|Medtr3g137460.1 154 40.4 57.8 AUX/IAA protein chr03_pseudomolecule_IMGAG_V3 34861254-34858528 E EGN_Mt090430 20090702
grape_pep GSVIVT01035866001 202 49.4 59.7  
castor_bean_cds 29848.m004617 111 90.2 90.2 ATP binding protein, putative
castor_bean_pep 29848.m004617 226 58.0 64.9 ATP binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0237221.10 length: 200 aa.
IPR011525 Aux/IAA-ARF-dimerisation
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 27.262 120-199
no_ID  
HMMPfam PF02309 AUX_IAA 1.4e-31 18-197
superfamily SSF54277 CAD 2.1e-09 115-195