| JcS_102326 | JcCB0427261(+) =JcCB0235951(+) =JcCB0103441(+) =JcCB0096691(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9T5Q7_RICCO | 114 | 50.0 | 68.1 | (tr|B9T5Q7) RNA binding protein, putative OS=Ricinus communis GN=RCOM_0366260 PE=4 SV=1 |
| Arabidopsis_pep | AT4G26650.2 | 108 | 61.5 | 82.1 | | Symbols: | RNA recognition motif (RRM)-containing protein | chr4:13445265-13447592 FORWARD |
| soybean_pep | Glyma20g34330.1 | 106 | 53.4 | 73.9 | |
| Medicago_pep | IMGA|Medtr2g030270.3 | 105 | 46.6 | 65.5 | Nucleotide-binding, alpha-beta plait chr02_pseudomolecule_IMGAG_V3 8350998-8348567 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01009297001 | 106 | 51.5 | 72.2 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | 28976.m000161 | 114 | 50.0 | 68.1 | RNA binding protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0235951.10 | length: 186 aa. | |||
| IPR000504 | RNA recognition motif, RNP-1 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 4e-18 | 32-100 |
| HMMSmart | SM00360 | no description | 9e-23 | 31-103 |
| ProfileScan | PS50102 | RRM | 18.410 | 30-107 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 5.4e-21 | 16-145 |
| no_ID | ||||
| HMMPanther | PTHR10432 | RNA-BINDING | 5.1e-36 | 1-155 |
| HMMPanther | PTHR10432:SF14 | RNA-BINDING | 5.1e-36 | 1-155 |
| Seg | seg | seg | NA | 124-134 |
| superfamily | SSF54928 | RNA-binding | 2.3e-23 | 2-150 |