Jatropha Genome Database

JcCB0235361.10 (JcS_100264.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0235361
Scaffold:
JcS_100264 JcCB1001991(-) =JcCA0153791(+) =JcCB0067191(+) =JcCB0016371(+) =JcCB0235361(+) =JcCA0261221(-) =JcCB0235321(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R8K6_RICCO 516 76.7 80.3 (tr|B9R8K6) Cell division protease ftsH, putative OS=Ricinus communis GN=RCOM_1600540 PE=4 SV=1
Arabidopsis_pep AT5G42270.1 425 66.3 72.0 | Symbols: VAR1, FTSH5 | VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase | chr5:16902659-16905102 FORWARD
soybean_pep Glyma06g02200.1 424 80.1 83.7  
Medicago_pep IMGA|Medtr7g010070.1 170 44.1 60.8 Peptidase S26A, signal peptidase I; AAA ATPase; Peptidase M41, FtsH extracellular chr07_pseudomolecule_IMGAG_V3 2056230-2052698 E EGN_Mt090430 20090702
grape_pep GSVIVT01008686001 202 99.0 100.0  
castor_bean_cds 30170.m014336 795 84.3 84.3 Cell division protease ftsH, putative
castor_bean_pep 30170.m014336 516 76.7 80.3 Cell division protease ftsH, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00944 1715 98.8 98.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0235361.10 length: 353 aa.
IPR003959 ATPase, AAA-type, core
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 9.6e-16 298-352
no_ID  
Gene3D G3DSA:3.40.50.300 no description 5.7e-25 246-353
HMMPanther PTHR23076 METALLOPROTEASE 1.7e-91 134-353
HMMPanther PTHR23076:SF10 CELL 1.7e-91 134-353
Seg seg seg NA 19-35
66-77
210-224
229-240
superfamily SSF52540 P-loop 2.1e-26 246-350