Jatropha Genome Database

JcCB0230371.10 (JcS_109028.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0230371
Scaffold:
JcS_109028 JcCB0230371(-) =JcCA0020831(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9R8R0_RICCO 1080 81.1 88.3 (tr|B9R8R0) Glutamate receptor 3 plant, putative OS=Ricinus communis GN=RCOM_1601690 PE=4 SV=1
Arabidopsis_pep AT1G42540.1 915 69.2 80.5 | Symbols: ATGLR3.3, GLR3.3 | ATGLR3.3; intracellular ligand-gated ion channel | chr1:15973489-15976703 FORWARD
soybean_pep Glyma06g01860.1 958 71.1 83.6  
Medicago_pep IMGA|Medtr3g160070.1 952 71.1 82.9 Ionotropic glutamate receptor; Extracellular ligand-binding receptor chr03_pseudomolecule_IMGAG_V3 42065090-42060311 E EGN_Mt090430 20090702
grape_pep GSVIVT01013400001 993 74.1 84.4  
castor_bean_cds 30170.m013795 1758 86.7 86.7 glutamate receptor 3 plant, putative
castor_bean_pep 30170.m013795 1080 81.1 88.3 glutamate receptor 3 plant, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c12054 1417 99.3 99.3  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0230371.10 length: 639 aa.
IPR001320 Ionotropic glutamate receptor
method AccNumber shortName E-value location
Molecular Function GO:0004970 ionotropic glutamate receptor activity    
Molecular Function GO:0005234 extracellular-glutamate-gated ion channel activity    
Cellular Component GO:0016020 membrane    
HMMPfam PF00060 Lig_chan 6.2e-38 370-622
HMMSmart SM00079 no description 4.3e-65 249-591
IPR001638 Extracellular solute-binding protein, family 3
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0030288 outer membrane-bounded periplasmic space    
HMMPfam PF00497 SBP_bac_3 3.6e-21 268-589
IPR001828 Extracellular ligand-binding receptor
HMMPfam PF01094 ANF_receptor 2.7e-27 3-183
IPR015683 Glutamate receptor-related
HMMPanther PTHR18966 IONOTROPIC 0 5-595
no_ID  
Gene3D G3DSA:3.40.190.10 no description 2.7e-17 243-372
HMMPanther PTHR18966:SF7 GLUTAMATE 0 5-595
Seg seg seg NA 41-53
430-442
superfamily SSF53822 Periplasmic 1e-32 3-242
superfamily SSF53850 Periplasmic 2.5e-44 247-595