Jatropha Genome Database

JcCB0229931.10 (JcS_100073.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0229931
Scaffold:
JcS_100073 JcCB0251321(-) =JcCA0288061(-) =JcCB0432331(+) =JcCB0229931(+) =JcCA0012252(-) =JcCB0687271(+) =JcCB0339751(-) =JcCB0763531(+) =JcCB0332961(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S4R7_RICCO 261 65.2 71.1 (tr|B9S4R7) DNA binding protein, putative OS=Ricinus communis GN=RCOM_0991570 PE=3 SV=1
Arabidopsis_pep AT3G54620.1 103 37.5 48.4 | Symbols: ATBZIP25, BZO2H4, BZIP25 | BZIP25 (BASIC LEUCINE ZIPPER 25); protein heterodimerization/ transcription factor | chr3:20218085-20220341 REVERSE
soybean_pep Glyma20g36750.1 117 37.3 53.7  
Medicago_pep IMGA|Medtr7g140980.1 100 41.0 56.7 Light-inducible protein CPRF-2, related chr07_pseudomolecule_IMGAG_V3 34043703-34046960 E EGN_Mt090430 20090702
grape_pep GSVIVT01000714001 138 41.1 53.8  
castor_bean_cds 29883.m001986 674 89.5 89.5 DNA binding protein, putative
castor_bean_pep 29883.m001986 261 65.2 71.1 DNA binding protein, putative
JAT_13201ests gi|268522545|gb|FM896549.1|FM896549 77.8 88.7 88.7 FM896549 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003784, mRNA sequence
KJC_r1 KJC_c03023 77.8 88.7 88.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0229931.10 length: 227 aa.
IPR004827 Basic-leucine zipper (bZIP) transcription factor
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00338 no description 4.1e-17 88-152
PatternScan PS00036 BZIP_BASIC NA 95-110
ProfileScan PS50217 BZIP 11.599 90-142
IPR011616 bZIP transcription factor, bZIP-1
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
HMMPfam PF00170 bZIP_1 3e-14 91-147
IPR020983 Basic leucine-zipper, C-terminal
HMMPfam PF12498 bZIP_C 1e-25 159-225
no_ID  
Coil coil coiled-coil NA 94-136
150-178
Seg seg seg NA 62-84
99-110
125-138