Jatropha Genome Database

JcCB0229861.10 (JcS_100129.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0229861
Scaffold:
JcS_100129 JcCA0301881(+) =JcCB0062531(-) =JcCA0150751(+) =JcCB0228191(-) =JcCA0221281(-) =JcCB0229861(-) =JcCB0103991(+) =JcCA0015901(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S7H9_RICCO 602 87.3 95.4 (tr|B9S7H9) Phosphoribosylaminoimidazole carboxylase atpase-subunit, putative OS=Ricinus communis GN=RCOM_0607690 PE=4 SV=1
Arabidopsis_pep AT2G37690.1 566 81.4 90.7 | Symbols: | phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative | chr2:15806111-15810240 FORWARD
soybean_pep Glyma10g30620.1 548 79.9 89.5  
Medicago_pep IMGA|Medtr1g094020.1 546 79.0 89.2 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; Sugar transporter superfamily; Phosphoribosylaminoimidazole carboxylase, ATPase subunit; chr01_pseudomolecule_IMGAG_V3 19332736-19338644 E EGN_Mt090430 20090702
grape_pep GSVIVT01036258001 602 87.3 93.8  
castor_bean_cds 29680.m001662 1154 87.7 87.7 phosphoribosylaminoimidazole carboxylase atpase-subunit, putative
castor_bean_pep 29680.m001662 602 87.3 95.4 phosphoribosylaminoimidazole carboxylase atpase-subunit, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0229861.10 length: 422 aa.
IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
method AccNumber shortName E-value location
HMMPfam PF02222 ATP-grasp 1.1e-57 146-317
IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit
Molecular Function GO:0004638 phosphoribosylaminoimidazole carboxylase activity    
Biological Process GO:0006189 'de novo' IMP biosynthetic process    
HMMPanther PTHR23047:SF1 PHOSPHORIBOSYLAMINOIMIDAZOLE 9.9e-159 99-415
HMMTigr TIGR01161 purK: 2.1e-112 83-407
IPR011054 Rudiment single hybrid motif
superfamily SSF51246 Rudiment 1.3e-14 341-415
IPR011761 ATP-grasp fold
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005524 ATP binding    
ProfileScan PS50975 ATP_GRASP 44.256 142-330
IPR013816 ATP-grasp fold, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.470.20 no description 1.5e-66 195-409
IPR013817 Pre-ATP-grasp fold
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.40.50.20 no description 4.5e-05 97-146
IPR016185 PreATP-grasp-like fold
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005524 ATP binding    
superfamily SSF52440 PreATP-grasp 1.5e-07 96-136
no_ID  
HMMPanther PTHR23047 PHOSPHORIBOSYLAMINOIMIDAZOLE 9.9e-159 99-415
superfamily SSF56059 Glutathione 1.3e-59 137-339