Jatropha Genome Database

JcCB0225661.10 (JcS_200692.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0225661
Scaffold:
JcS_200692 JcCB0225661(+) =JcCD0104983(-) =JcCA0189971(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9MST0_SOYBN 599 90.3 90.6 (tr|B9MST0) Clock-associated PAS protein ZEITLUPE 2 OS=Glycine max GN=ZTL2 PE=2 SV=1
Arabidopsis_pep AT5G57360.1 578 85.8 89.7 | Symbols: ZTL, LKP1, ADO1, FKL2 | ZTL (ZEITLUPE); protein binding / ubiquitin-protein ligase | chr5:23241597-23244256 FORWARD
soybean_pep Glyma13g00860.1 599 90.3 90.6  
Medicago_pep IMGA|Medtr2g041400.1 587 87.9 89.1 PAS; Speract/scavenger receptor; Cyclin-like F-box; Galactose oxidase, central; chr02_pseudomolecule_IMGAG_V3 11358050-11349490 E EGN_Mt090430 20090702
grape_pep GSVIVT01035529001 412 69.0 72.1  
castor_bean_cds 29639.m000148 1187 89.5 89.5 hypothetical protein
castor_bean_pep 29639.m000148 598 90.0 90.9 hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c01866 2052 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0225661.10 length: 345 aa.
IPR006652 Kelch repeat type 1
method AccNumber shortName E-value location
HMMPfam PF01344 Kelch_1 2.6e-05 29-70
IPR011043 Galactose oxidase/kelch, beta-propeller
superfamily SSF50965 Galactose 2.3e-09 16-241
249-334
IPR011498 Kelch repeat type 2
Molecular Function GO:0005515 protein binding    
HMMPfam PF07646 Kelch_2 8.3e-05 186-236
254-300
IPR015915 Kelch-type beta propeller
Gene3D G3DSA:2.120.10.80 no description 5.9e-26 16-314
no_ID  
HMMPanther PTHR23244 KELCH 1.3e-204 1-339
HMMPanther PTHR23244:SF9 ADAGIO 1.3e-204 1-339
Seg seg seg NA 3-15
235-251
332-343