Jatropha Genome Database

JcCB0222931.10 (JcS_200109.30)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0222931
Scaffold:
JcS_200109 JcCD0120336(-) =JcCA0042771(-) =JcPR04IVX7S(-) =JcCB0104641(+) =JcCB0222931(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q0KIP5_SOLDE 401 42.0 54.9 (tr|Q0KIP5) Polyprotein, putative OS=Solanum demissum GN=SDM1_42t00023 PE=4 SV=1
Arabidopsis_pep AT4G23160.1 238 36.9 55.1 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma10g10160.1 264 53.1 72.0  
Medicago_pep IMGA|Medtr5g048830.1 203 45.4 61.8 Polynucleotidyl transferase, Ribonuclease H fold chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H EGN_Mt090430 20090702
grape_pep GSVIVT01028343001 94.4 65.6 78.7  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04660 841 93.3 93.3  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0222931.10 length: 768 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 4.4e-60 361-540
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 1.5e-153 32-725
Seg seg seg NA 152-186
458-470
superfamily SSF56672 DNA/RNA 5.3e-23 374-723