Jatropha Genome Database

JcCB0220081.10 (JcS_101735.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0220081
Scaffold:
JcS_101735 JcCA0285831(-) =JcCB0124191(+) =JcCB0220081(+) =JcCA0132221(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A9ZN14_HEVBR 550 91.2 93.2 (tr|A9ZN14) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Hevea brasiliensis GN=HbHDS PE=2 SV=1
Arabidopsis_pep AT5G60600.2 506 84.3 89.4 | Symbols: GCPE, ISPG, CSB3, CLB4, HDS | HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE); 4 iron, 4 sulfur cluster binding / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | chr5:24359447-24363274 FORWARD
soybean_pep Glyma13g40140.2 522 84.5 91.9  
Medicago_pep IMGA|Medtr2g110470.2 517 84.8 90.9 IspG protein; Dihydropteroate synthase-like chr02_pseudomolecule_IMGAG_V3 25973011-25967013 E EGN_Mt090430 20090702
grape_pep GSVIVT01025182001 531 86.8 91.6  
castor_bean_cds 28076.m000417 1025 91.4 91.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
castor_bean_pep 28076.m000417 478 89.1 90.9 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c01383 1592 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0220081.10 length: 296 aa.
IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type
method AccNumber shortName E-value location
Biological Process GO:0016114 terpenoid biosynthetic process    
Molecular Function GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF04551 GcpE 4e-44 133-286
no_ID  
Seg seg seg NA 153-167
superfamily SSF56014 Sulfite 2.2e-15 192-284