Jatropha Genome Database

JcCB0215961.20 (JcS_108941.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0215961
Scaffold:
JcS_108941 JcCB0215961(-) =JcCA0091211(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RG29_RICCO 590 92.4 95.5 (tr|B9RG29) DNA replication licensing factor MCM2, putative OS=Ricinus communis GN=RCOM_1438760 PE=3 SV=1
Arabidopsis_pep AT1G44900.1 440 72.4 87.0 | Symbols: MCM2 | ATP binding / DNA binding / DNA-dependent ATPase | chr1:16970291-16974457 FORWARD
soybean_pep Glyma07g36680.1 519 81.5 89.1  
Medicago_pep IMGA|Medtr8g137340.1 501 78.9 87.9 MCM; Nucleic acid-binding, OB-fold, subgroup chr08_pseudomolecule_IMGAG_V3 32903343-32908349 E EGN_Mt090430 20090702
grape_pep GSVIVT01001119001 508 80.5 89.8  
castor_bean_cds 30128.m008586 948 87.7 87.7 DNA replication licensing factor MCM2, putative
castor_bean_pep 30128.m008586 590 92.4 95.5 DNA replication licensing factor MCM2, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0215961.20 length: 314 aa.
IPR001208 DNA-dependent ATPase MCM
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
FPrintScan PR01657 MCMFAMILY 5.8e-14 5-18
29-41
56-64
HMMPfam PF00493 MCM 3.4e-70 2-207
HMMSmart SM00350 no description 2.5e-16 1-208
ProfileScan PS50051 MCM_2 35.856 1-82
no_ID  
Gene3D G3DSA:3.40.50.300 no description 0.00071 2-67
HMMPanther PTHR11630 DNA 8.8e-137 1-289
HMMPanther PTHR11630:SF44 DNA 8.8e-137 1-289
superfamily SSF52540 P-loop 1.8e-16 3-231