Jatropha Genome Database

JcCB0213661.20 (JcS_101108.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0213661
Scaffold:
JcS_101108 JcCB0213661(-) =JcCA0310141(+) =JcCA0151911(-) =JcCB0123971(-) =JcCB0649011(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SMB4_RICCO 252 60.3 62.6 (tr|B9SMB4) ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_0298500 PE=4 SV=1
Arabidopsis_pep AT5G13010.1 239 56.5 61.7 | Symbols: EMB3011 | EMB3011 (embryo defective 3011); ATP binding / RNA helicase/ helicase/ nucleic acid binding | chr5:4122747-4128660 FORWARD
soybean_pep Glyma13g41740.1 243 58.4 61.7  
Medicago_pep IMGA|Medtr3g076080.1 214 53.6 60.4 Blue (type 1) copper domain; Amine oxidase; Helicase-associated region chr03_pseudomolecule_IMGAG_V3 17526772-17523313 E EGN_Mt090430 20090702
grape_pep GSVIVT01028153001 90.5 39.8 57.5  
castor_bean_cds 28644.m000943 1168 87.5 87.5 ATP-dependent RNA helicase, putative
castor_bean_pep 28644.m000943 252 60.3 62.6 ATP-dependent RNA helicase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02813 1376 92.8 92.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0213661.20 length: 383 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR18934 ATP-DEPENDENT 1.5e-54 109-320
Seg seg seg NA 179-191
255-265
280-291
superfamily SSF52540 P-loop 2.5e-20 109-285