Jatropha Genome Database

JcCB0211161.10 (JcS_102281.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0211161
Scaffold:
JcS_102281 JcCB0384311(+) =JcCB0211161(-) =JcCB0017171(-) =JcCA0079341(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9ILD6_POPTR 665 84.9 91.9 (tr|B9ILD6) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_779207 PE=4 SV=1
Arabidopsis_pep AT2G24610.1 609 77.7 87.4 | Symbols: ATCNGC14, CNGC14 | ATCNGC14; calmodulin binding / cyclic nucleotide binding / ion channel | chr2:10457105-10460351 FORWARD
soybean_pep Glyma06g08170.1 661 85.2 90.6  
Medicago_pep IMGA|Medtr3g133160.1 650 83.6 89.8 Cyclic nucleotide-binding; Ion transport protein chr03_pseudomolecule_IMGAG_V3 33670090-33666246 H EGN_Mt090430 20090702
grape_pep GSVIVT01033170001 651 84.4 89.8  
castor_bean_cds 29848.m004476 694 90.6 90.6 Cyclic nucleotide-gated ion channel, putative
castor_bean_pep 30147.m013975 555 69.8 82.2 Cyclic nucleotide-gated ion channel, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c05192 85.7 81.4 81.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0211161.10 length: 383 aa.
IPR000595 Cyclic nucleotide-binding
method AccNumber shortName E-value location
HMMPfam PF00027 cNMP_binding 1.5e-08 302-382
ProfileScan PS50042 CNMP_BINDING_3 11.359 279-383
IPR005821 Ion transport
Molecular Function GO:0005216 ion channel activity    
Biological Process GO:0006811 ion transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00520 Ion_trans 6.4e-08 14-196
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 4.9e-17 262-383
IPR018490 Cyclic nucleotide-binding-like
superfamily SSF51206 cAMP-binding 1.1e-36 204-383
no_ID  
HMMPanther PTHR10217 VOLTAGE 7.4e-210 15-383
HMMPanther PTHR10217:SF7 CYCLIC 7.4e-210 15-383
superfamily SSF81324 Voltage-gated 2.6e-16 17-246