| JcS_100029 | JcCA0079011(+) =JcCB0224691(+) =JcCB0309421(+) =JcCB0216031(+) =JcCB0293431(+) =JcCB0364041(-) =JcCB0094891(+) =JcCB0201931(-) =JcCA0154801(-) =JcCB0542031(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | Q09HM7_9ROSI | 545 | 99.6 | 99.6 | (tr|Q09HM7) Putative F-box and leucine-rich repeat protein OS=Jatropha curcas PE=4 SV=1 |
| Arabidopsis_pep | AT5G23340.1 | 410 | 73.4 | 88.0 | | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box family protein (FBL4) (TAIR:AT4G15475.1); Has 9095 Blast hits to 3545 proteins in 210 species: Archae - 0; Bacteria - 454; Metazoa - 4575; Fungi - 774; Plants - 2118; Viruses - 15; Other Eukaryotes - 1159 (source: NCBI BLink). | chr5:7856314-7857983 FORWARD |
| soybean_pep | Glyma10g43260.1 | 402 | 73.1 | 87.6 | |
| Medicago_pep | IMGA|Medtr2g026110.1 | 105 | 30.3 | 47.9 | Cyclin-like F-box chr02_pseudomolecule_IMGAG_V3 7083652-7076263 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01017859001 | 103 | 29.0 | 45.8 | |
| castor_bean_cds | 30131.m007259 | 728 | 86.1 | 86.1 | similarity to glucose regulated repressor protein, putative |
| castor_bean_pep | 30131.m007259 | 480 | 86.6 | 94.2 | similarity to glucose regulated repressor protein, putative |
| JAT_13201ests | gi|257022679|gb|GT005826.1|GT005826 | 65.9 | 78.9 | 78.9 | TransId-230837 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEVN24TV similar to Putative F-box and leucine-rich repeat protein - Jatropha curcas, mRNA sequence |
| KJC_r1 | KJC_c02081 | 1090 | 99.8 | 99.8 |
| JcCB0201931.10 | length: 276 aa. | |||
| IPR006553 | Leucine-rich repeat, cysteine-containing subtype | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMSmart | SM00367 | no description | 47 | 98-123 124-149 150-175 176-201 202-227 229-254 255-276 |
| no_ID | ||||
| Gene3D | G3DSA:3.80.10.10 | no description | 3.6e-44 | 11-224 |
| HMMPanther | PTHR23125 | F-BOX/LEUCINE | 6.4e-150 | 20-276 |
| HMMPanther | PTHR23125:SF66 | gb | 6.4e-150 | 20-276 |
| superfamily | SSF52047 | RNI-like | 5.7e-36 | 58-271 |