Jatropha Genome Database

JcCB0196521.10 (JcS_104911.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0196521
Scaffold:
JcS_104911 JcCB0466381(+) =JcCB0196521(-) =JcCB0039021(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R865_RICCO 652 83.7 89.6 (tr|B9R865) Auxin response factor, putative OS=Ricinus communis GN=RCOM_1597120 PE=4 SV=1
Arabidopsis_pep AT1G19850.1 343 58.1 69.5 | Symbols: MP, ARF5, IAA24 | MP (MONOPTEROS); transcription factor | chr1:6887353-6891182 FORWARD
soybean_pep Glyma17g37580.1 439 59.1 73.8  
Medicago_pep IMGA|Medtr4g161090.1 147 44.5 62.8 Transcriptional factor B3; Auxin response factor; Aux/IAA_ARF_dimerisation chr04_pseudomolecule_IMGAG_V3 41048269-41053932 E EGN_Mt090430 20090702
grape_pep GSVIVT01009865001 445 66.1 76.5  
castor_bean_cds 30170.m014161 954 86.5 86.5 Auxin response factor, putative
castor_bean_pep 30170.m014161 652 83.7 89.6 Auxin response factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03604 2248 99.9 99.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0196521.10 length: 384 aa.
IPR011525 Aux/IAA-ARF-dimerisation
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 26.224 271-353
no_ID  
HMMPfam PF02309 AUX_IAA 1.1e-24 255-359