Jatropha Genome Database

JcCB0189041.20 (JcS_100357.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0189041
Scaffold:
JcS_100357 JcCB0888501(+) =JcCD0175893(-) =JcCA0079711(-) =JcCB0071481(+) =JcCB0189041(-) =JcCB0295121(+) =JcCB0451531(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SZ77_RICCO 295 79.5 88.6 (tr|B9SZ77) Light-inducible protein CPRF-2, putative OS=Ricinus communis GN=RCOM_0484650 PE=3 SV=1
Arabidopsis_pep AT5G28770.2 152 50.3 66.3 | Symbols: BZO2H3 | BZO2H3; DNA binding / protein heterodimerization/ transcription factor | chr5:10796648-10798147 REVERSE
soybean_pep Glyma10g30410.1 243 69.7 83.4  
Medicago_pep IMGA|Medtr7g140980.1 198 61.7 78.3 Light-inducible protein CPRF-2, related chr07_pseudomolecule_IMGAG_V3 34043703-34046960 E EGN_Mt090430 20090702
grape_pep GSVIVT01021790001 183 61.5 66.5  
castor_bean_cds 29598.m000468 400 84.5 84.5 Light-inducible protein CPRF-2, putative
castor_bean_pep 29598.m000468 295 79.5 88.6 Light-inducible protein CPRF-2, putative
JAT_13201ests gi|268522545|gb|FM896549.1|FM896549 797 99.8 99.8 FM896549 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003784, mRNA sequence
KJC_r1 KJC_c03023 733 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0189041.20 length: 196 aa.
IPR004827 Basic-leucine zipper (bZIP) transcription factor
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00338 no description 1e-10 1-56
ProfileScan PS50217 BZIP 10.013 1-48
IPR011616 bZIP transcription factor, bZIP-1
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
HMMPfam PF00170 bZIP_1 1.3e-12 1-49
IPR020983 Basic leucine-zipper, C-terminal
HMMPfam PF12498 bZIP_C 1.9e-36 63-186
no_ID  
Coil coil coiled-coil NA 5-40
54-75
HMMPanther PTHR13301 X-BOX 2.1e-05 1-45
HMMPanther PTHR13301:SF1 TGACG-MOTIF-BINDING 2.1e-05 1-45
Seg seg seg NA 3-14