Jatropha Genome Database

JcCB0188421.10 (JcS_105326.20)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0188421
Scaffold:
JcS_105326 JcCB0644471(+) =JcCB0188421(+) =JcPR11GR8GC(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5B919_VITVI 193 66.2 77.0 (tr|A5B919) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002640 PE=4 SV=1
Arabidopsis_pep AT4G23160.1 120 40.0 60.0 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma16g13610.1 132 42.6 68.1  
Medicago_pep IMGA|CU179634_24.1 124 42.6 62.5 Polynucleotidyl transferase, Ribonuclease H fold CU179634.6 87152-89450 H EGN_Mt090430 20090702
grape_pep GSVIVT01010555001 83.2 46.6 69.3  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0188421.10 length: 755 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 3.7e-47 355-490
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 1.7e-92 27-522
Seg seg seg NA 131-156
190-199
superfamily SSF56672 DNA/RNA 5.8e-13 343-489