Jatropha Genome Database

JcCB0186361.10 (JcS_100001.110)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0186361
Scaffold:
JcS_100001 JcCB0130751(-) =JcCA0312871(-) =JcCB0287701(+) =JcCB0171671(-) =JcCA0315721(-) =JcCB0186361(+) =JcCA0066941(+) =JcCA0264441(-) =JcPR10F8MCI(+) =JcCA0277701(-) =JcCB0465311(+) =JcCC0332622(+) =JcCB0455701(-) =JcCB0698151(+) =JcCB0545461(+) =JcCA0316711(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9GTD3_POPTR 578 78.7 86.4 (tr|B9GTD3) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_411680 PE=4 SV=1
Arabidopsis_pep AT3G63090.1 551 73.3 83.4 | Symbols: | ubiquitin thiolesterase | chr3:23313617-23314831 FORWARD
soybean_pep Glyma10g03040.1 556 72.4 85.4  
Medicago_pep IMGA|AC233676_39.1 550 73.2 83.9 Protein of unknown function DUF860, plant AC233676.2 156194-157369 E EGN_Mt090430 20090702
grape_pep GSVIVT01033438001 182 30.1 49.0  
castor_bean_cds 28153.m000278 438 82.9 82.9 conserved hypothetical protein
castor_bean_pep 28153.m000278 413 75.7 84.3 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0186361.10 length: 405 aa.
IPR021099 RNA recognition domain, plant
method AccNumber shortName E-value location
HMMPfam PF11955 PORR 3.9e-111 42-376
no_ID  
Coil coil coiled-coil NA 370-398
Seg seg seg NA 78-90