| JcS_108778 | JcCB0186071(-) =JcCB0669741(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | Q6RF31_POPTO | 119 | 95.0 | 100.0 | (tr|Q6RF31) MADS box transcription factor OS=Populus tomentosa GN=MADS1 PE=2 SV=1 |
| Arabidopsis_pep | AT4G24540.1 | 116 | 90.2 | 100.0 | | Symbols: AGL24 | AGL24 (AGAMOUS-LIKE 24); protein binding / protein heterodimerization/ protein homodimerization/ sequence-specific DNA binding / transcription factor | chr4:12671160-12673645 REVERSE |
| soybean_pep | Glyma01g02880.1 | 115 | 91.7 | 98.3 | |
| Medicago_pep | IMGA|Medtr5g075150.1 | 111 | 82.3 | 95.2 | Transcription factor, MADS-box chr05_pseudomolecule_IMGAG_V3 27322321-27325073 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01009171001 | 115 | 90.0 | 100.0 | |
| castor_bean_cds | 29838.m001690 | 139 | 85.5 | 85.5 | mads box protein, putative |
| castor_bean_pep | 29838.m001690 | 110 | 86.9 | 95.1 | mads box protein, putative |
| JAT_13201ests | gi|262091321|gb|GT228748.1|GT228748 | 60.0 | 90.0 | 90.0 | JC313 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL06SE.E07.scf 5', mRNA sequence |
| KJC_r1 | KJC_c08529 | 143 | 92.6 | 92.6 |
| JcCB0186071.10 | length: 67 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| FPrintScan | PR00404 | MADSDOMAIN | 4.8e-28 | 3-23 23-38 38-59 |
| HMMPfam | PF00319 | SRF-TF | 2.5e-27 | 9-59 |
| HMMSmart | SM00432 | no description | 4.9e-39 | 1-60 |
| PatternScan | PS00350 | MADS_BOX_1 | NA | 3-57 |
| ProfileScan | PS50066 | MADS_BOX_2 | 29.969 | 1-61 |
| superfamily | SSF55455 | SRF-like | 6.5e-26 | 1-61 |
| no_ID | ||||
| HMMPanther | PTHR11945 | MADS | 1.4e-36 | 10-61 |
| HMMPanther | PTHR11945:SF19 | MADS | 1.4e-36 | 10-61 |